Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910150.1_cds_XP_016460239.1_53679
CDS Infomation

[gene=LOC107783733] [db_xref=GeneID:107783733] [protein=potassium channel SKOR-like] [protein_id=XP_016460239.1] [location=join(12592..12803,15862..16086,16174..16237,16774..17113,17214..17509,17610..17690,17872..17970,18090..18311,18665..18853,19028..19103,19196..19490,19630..19751,19867..20111)] [gbkey=CDS]
Sequence

ATGACGAGAGTAGCAGAGGAAGTACTGGAGACGATGAATATGAATGGAGGAGTGGAGTAT
GAAGTAGAAGATGTTAGAGATAAAATAGAATCTTCTAGAGGAAGTCGATTTCAACTTATA
GAAGACGATCTGGGTTTAAACTTGTTTCGCCGGAGAATTAGCCGCCTTAAGATTAATCTC
TCTCAAGTTTTCATTATTCATCCTGAAAACAGGTGGTACCGGATGTGGGAAAATTTTATC
CTTATATGGTCAATTTATTCATCATTTTTCACACCTATGGAGTTTGCCTTCTTCAATGGA
TTACCAAGGAAACTCTTTCTCCTAGACATTTGTGGTCAAATAGTTTTTCTTGTGGATATA
GTCCTCCAATTCTTTGTTGCCTATAGAGATAGTCAGACTTACAAGATGGTATACAAACGA
ACCCCTATTGCTCTTCGGTACTTGAAATCTCATTTTATTCTTGATTTTCTTAGTTGCATG
CCTTGGGATATAATTTACAAGGCTGTTGGCAGCAAAGAGGAAGTGAGATACCTTTTATGG
ATTAGGTTAAGCAGGGCGCGCAGAATTACTTACTTTTTTCAGAAAATGGAAAAAGATATT
CGGATCAATTACCTCTTCACCAGAATTGTAAAACTTATCACTGTTGAACTCTACTGCACA
CATACAGCTGCCTGTATCTTTTACTATTTGGCGACTACGCTGTCTGAACAGCAAGAAGGT
TACACATGGATTGGTAGTTTGAAATTGGGAGATTACAGTTATTCAAACTTCAGAGATATT
GATCTTTGGACGCGATACACTACTTCAATGTATTTTGCTATTGTTACTATGGCAACTGTT
GGTTATGGAGATATACATGCAGTCAATTTGAGGGAAATGATATTTGTCATGATTTATGTC
TCCTTTGATATGATTCTTAGTGCTTATTTGATCGGTAACATGACAGCTCTAATTGTGAAA
GGATCAAAAACTGAACGATACAGAGATAAAATGACAGATCTATTGAAATATATGAACAGA
AATAGACTCGGAAGAGACATACGTAATCAAATAAAAGGTCACTTGCGATTACAATATGAA
AGTGCTTACACTGATGCAGCTGTTCTCCAGGACATTCCAATCTCAATCCGCGCCAAGATT
TCGCAGAGTTTATATCAGTCTTACATAGAAAATGTTCCTCTTTTTAAGGGATGTTCCTCG
GAATTCATAAGTCAAGTTGTAACTCGAGTCCACGAAGAATTTTTCCTCCCCGGAGAAGTG
ATAATGGAACAAGGGAATGTAGTAGACCAGCTTTATTTTGTCTGTCATGGCGTTCTGGAG
GAGGTTGGTATAGCGAAGGATGGATCAGAAGAGACAGTGGCACTTCTTGAACCTAACAGC
TCATTCGGAGATATTTCCATTGTTTGCAACATTCCTCAACCATATACAGTTCGTGTTTGC
GAACTGTGTAGGCTCATACGTATTGATAAGCAGTCATTTTCCAATATTCTGGAGATTTAT
TTTCATGATGGAAGAAGAATCTTGAGTAATTTACTACAGGGAAAAGAATCTAATCTCCGC
GTGAAGCAACTGGAGTCAGATATCGCATTCCATATTGGGAAGCACGAAGCAGAACTTGCT
TTGAAAGTGAATAGTGCAGCTTATCATGGTGATTTGCATCAGCTGAAGAGTTTAATTCGC
GCTGGAGCAGATCCCAACAAGAAAGATTATGATGGAAGATCACCTCTGCATCTTGCAGCA
TCGAGAGGCTATGAAGACATAACTCTTTTCCTTATCCAAGAAGGCGTTGATATAAACGCT
CCAGATAAATTTGGCAACACGCCGCTGCTTGAAGCAATCAAGAGTGGACATGATCGTGTC
GCTTCATTACTTGTTAAAGAAGGTGCCTTCTTGAAAATTGAAAATGCTGGTAGCTTCCTG
TGTATGGTGATAGCAAAGGGCGATTCAGATCTATTGCGAAGGCTATTGTCCAACGGTGTT
GATCCCAACTCTAAAGACTATGATCAACGAACACCACTTCATGTTGCTGCTTCTCAAGGA
TTATACTCAATGGCGAAATTGCTTTTGGGAGCTGGCGCTTCTGTTTTCACAAAGGATAGA
TGGGGAAATACTCCAGTTGATGAAGCTAGAGTAAGTGGAAACAAGCAAATGATCGGTCTT
CTGGAAGAAGCAAAATCTGCTCAGTTATCTGAATTCCCTGATGTTCCACATGAGATCTCA
GAAAAATTGCGTCCGAGGAAATGTACTGTGTTTCCTTTCCACCCATGGGAGTCCAAAGAT
GTGAGAAAACATGGTGTTGTAATGTGGATACCTCAGACTATCGAGGAGCTCGTTACCACA
GCATCTGAGAAACTCAATTTTCCATCTGATTCTTGTATATTATCAGAAGATGCTGGTAAA
ATTCTTGATATAGATATGATTGCTGATGGTCAAAAATTGTACTTGATCAATGATCAATCA
ACTTGA

Peptide Sequence

PEP ID

XP_016460239.1
PEP Infomation

PREDICTED: potassium channel SKOR-like [Nicotiana tabacum]
Sequence

MTRVAEEVLETMNMNGGVEYEVEDVRDKIESSRGSRFQLIEDDLGLNLFRRRISRLKINL
SQVFIIHPENRWYRMWENFILIWSIYSSFFTPMEFAFFNGLPRKLFLLDICGQIVFLVDI
VLQFFVAYRDSQTYKMVYKRTPIALRYLKSHFILDFLSCMPWDIIYKAVGSKEEVRYLLW
IRLSRARRITYFFQKMEKDIRINYLFTRIVKLITVELYCTHTAACIFYYLATTLSEQQEG
YTWIGSLKLGDYSYSNFRDIDLWTRYTTSMYFAIVTMATVGYGDIHAVNLREMIFVMIYV
SFDMILSAYLIGNMTALIVKGSKTERYRDKMTDLLKYMNRNRLGRDIRNQIKGHLRLQYE
SAYTDAAVLQDIPISIRAKISQSLYQSYIENVPLFKGCSSEFISQVVTRVHEEFFLPGEV
IMEQGNVVDQLYFVCHGVLEEVGIAKDGSEETVALLEPNSSFGDISIVCNIPQPYTVRVC
ELCRLIRIDKQSFSNILEIYFHDGRRILSNLLQGKESNLRVKQLESDIAFHIGKHEAELA
LKVNSAAYHGDLHQLKSLIRAGADPNKKDYDGRSPLHLAASRGYEDITLFLIQEGVDINA
PDKFGNTPLLEAIKSGHDRVASLLVKEGAFLKIENAGSFLCMVIAKGDSDLLRRLLSNGV
DPNSKDYDQRTPLHVAASQGLYSMAKLLLGAGASVFTKDRWGNTPVDEARVSGNKQMIGL
LEEAKSAQLSEFPDVPHEISEKLRPRKCTVFPFHPWESKDVRKHGVVMWIPQTIEELVTT
ASEKLNFPSDSCILSEDAGKILDIDMIADGQKLYLINDQST

Transcript Sequence

Gene sequence data has not been registered.